Bioinformatics Platform

• Python website: https://www.python.org/downloads/
• How to install python and VS-Code:https://www.programiz.com/python-programming/getting-started

• Worshop support: introduction_to_python.ipynb
• Datasets:
  • cancer_data.csv
  • exercice_data.csv
• Exercice solution: solutions.ipynb

• Python for beginners
• Basic cheatsheet
• Complete cheatsheets

Useful modules:
Methods and modules cheeatsheets:

• Modules cheat sheet 1
• Modules cheat sheet 2

• import os
  os: This module provides a way to interact with the operating system. It allows you to perform operations such as manipulating files and directories, retrieving environment information, and more.
  ->How to use OS
• import sys
  sys: This module allows you to interact with the Python interpreter and provides functions and variables to manipulate different parts of the Python runtime environment.
  ->How to use sys
• import math
  math: This module provides basic mathematical functions like trigonometric, logarithmic functions, etc.
  ->How to use math
• import datetime
  datetime: This module provides classes for manipulating dates and times.
  ->How to use datetime
• import random
  random: This module allows you to generate random numbers and choose elements randomly.
  ->How to use random
• import re
  re: This module provides tools for working with regular expressions, allowing you to search and manipulate strings.
  ->How to use re / RegEx
  Cheatsheet

Pandas
Install with: pip install pandas
Load with: import pandas as pd

• Cheatsheet: Pandas_Cheat_Sheet.pdf
• Tutorials:
  • W3schools classes
  • Summary tutorial
  • Complete user guide

NumPy
Install with: pip install numpy
Load with: import numpy as np

• Cheatsheet: Numpy_Cheat_Sheet.pdf
• Tutorials:
  • W3schools classes
  • Complete user guide

• Scipy
  Included with NumPy.
  Load with: import scipy
  
• Cheatsheet: SciPy.pdf

Matplotlib
Install with: pip install matplotlib
Load with: import matplotlib as mpl

• Cheatsheet : Matplotlib.pdf
• Documentation:
  • Beginners
  • Intermediate
  • Tips
  • User guide

Seaborn
Install with: pip install seaborn
Load with: import seaborn as sns

• Cheatsheet : Seaborn.pdf
• Complete user guide: Seaborn guide

Plotly
Install with: pip install plotly
Load with: import plotly.express as px

• Cheatsheet : Plotly.pdf
• Complete user guide: Plotly guide